genomics | CCMNet

Name	Region	Skills	Interests
Alyssa Pivirotto	ACCESS CSSN, Campus Champions	bash bioinformatics biology conda data-analysis data-science genomics github more...	arcgis machine-learning
Carrie Brown	CAREERS, ACCESS CSSN, CCMNet	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
David Carlson	ACCESS CSSN, OnDemand	bash bioinformatics biology gatk genomics ookami python r more...	ACCESS bash bioinformatics containers genomics
Daniel Morales	Campus Champions	ACCESS ACCESS-allocations ACCESS-credits adding-users allocation-management anaconda bash batch-jobs more...	ACCESS ACCESS-allocations allocation-management bioinformatics biology community-outreach conda deep-learning more...
Diana Toups Dugas	RMACC, SWEETER, Campus Champions	bioinformatics biology genomics proposal-development research-facilitation software-carpentry training workforce-development
Feseha Abebe-Akele	CCMNet	abstract ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website account adding-users more...	ACCESS ACCESS-allocations account ACES administering-hpc ai allocations-extension allocations-proposal more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Nil Mu	CCMNet	artificial-intelligence bioinformatics computer-science data-science genomics hpc-arch-and-perf hpc-cluster-architecture hpc-operations more...
Nicholas Panchy	Campus Champions	bash bioinformatics biology conda easybuild genomics modules open-ondemand more...
Russell Hofmann	ACCESS CSSN, CCMNet	computational-chemistry data-analysis data-science dft gaussian genomics gromacs kubernetes more...	administering-hpc cluster-support computational-chemistry data-analysis data-science dft gaussian genomics more...
Rob Harbert	Northeast	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics gis more...
Xiaoqin Huang	ACCESS CSSN	ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
Wesley Brashear	ACCESS CSSN, Campus Champions	bioinformatics biology genomics python r
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...
Yun Shen	CAREERS, Northeast, ACCESS CSSN, CCMNet	big-data bioinformatics data-analysis data-science genomics open-ondemand programming Programming more...

Name

Region

Skills

Interests

Alyssa Pivirotto

ACCESS CSSN, Campus Champions

bash

bioinformatics

biology

Carrie Brown

CAREERS, ACCESS CSSN, CCMNet

distributed-computing

David Carlson

ACCESS CSSN, OnDemand

Daniel Morales

Campus Champions

allocation-management

allocation-management

Diana Toups Dugas

RMACC, SWEETER, Campus Champions

research-facilitation

software-carpentry

training

workforce-development

Feseha Abebe-Akele

CCMNet

allocations-extension

allocations-proposal

more...

Jordan Hayes

Campus Champions

shuai liu

ACCESS CSSN

Nil Mu

CCMNet

artificial-intelligence

hpc-cluster-architecture

hpc-operations

more...

Nicholas Panchy

Campus Champions

Russell Hofmann

ACCESS CSSN, CCMNet

computational-chemistry

computational-chemistry

Rob Harbert

Northeast

distributed-computing

genomics

gis

more...

Xiaoqin Huang

ACCESS CSSN

allocations-extension

allocations-extension

Wesley Brashear

ACCESS CSSN, Campus Champions

William Lai

ACCESS CSSN

Yun Shen

CAREERS, Northeast, ACCESS CSSN, CCMNet

Affinity Groups

Logo	Name	Description	Tags	Join
	Genomics with OOD	This group is for anyone using Open OnDemand in genomics research. Whether you're working with sequencing data, analyzing genomic information, or optimizing workflows for bioinformatics tools, join us…	data-analysis genomics bioinformatics	Login to join

Announcements

Title	Date
Ookami Webinar	02/14/24

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Knowledge Base Resources

Title	Category	Tags	Skill Level
Awesome Jupyter Widgets (for building interactive scientific workflows or science gateway tools)	Learning	ai, computer-graphics, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, open-ondemand, science-gateway, c++, jupyterhub, python	Beginner, Intermediate, Advanced
Biopython Tutorial	Learning	bioinformatics, genomics, python	Beginner, Intermediate, Advanced
How the Little Jupyter Notebook Became a Web App: Managing Increasing Complexity with nbdev	Learning	data-sharing, data-management-software, data-reproducibility, github, workflow, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, science-gateway, software-carpentry, jupyterhub, programming, python	Beginner, Intermediate, Advanced